Data, software and programs
Programs and data sets for
protein-protein interaction extraction, as published in Bayesian inference of protein-protein
interactions from biological literature, Rajesh Chowdhary, Jinfeng Zhang, Jun S Liu, Bioinformatics,
25(12), 1536-1542 (2009).
PICAD corpus , as published in Mixture of logistic models and an ensemble
for protein-protein interaction extraction. Lindsey Bell, Jinfeng Zhang and Xufeng Niu, ACM-BCB, 2011, accepted.
Elastic Shape Analysis (ESA) for biomolecular structure comparison.